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Guide to Human Genome Computing, Second Edition [Hardcover]

Martin J. Bishop (Editor)

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Book Description

April 21, 1998 0121020517 978-0121020514 2
The Guide to Human Genome Computing is invaluable to scientists who wish to make use of the powerful computing tools now available to assist them in the field of human genome analysis. This book clearly explains access and use of sequence databases, and presents the various computer packages used to analyze DNA sequences, measure linkage analysis, compare and align DNA sequences from different genes or organisms, and infer structural and functional information about proteins from sequence data.
This Second Edition contains completely updated material. Rather than a revision of the previous volume, the Second Edition is essentially a new book, based on the subjects which will be of interest over the coming years. This new book is international, both in scope and authorship.

Computing resources for the following are clearly explained:
* Internet resources - databases etc.
* Genetic analysis
* Sib-pair studies
* Comparative mapping
* Radiation hybrids
* Sequence ready clone maps
* Human genome sequencing
* ESTs
* Gene prediction
* Gene expression

Editorial Reviews

From the Back Cover

Over the last decade, the growth of interest and activity in human genome mapping and sequencing has been spectacular. It has also posed major problems in relation to the analysis of the vast amount of data that has been generated. In the next decade, a representative human genome sequence will have been determined, and in the following decades the function of the encoded proteins and their networks of relationship will be fully elucidated. This is therefore an exceptionally exciting time in history.
However, it is also a time of great confusion. This book describes the bioinformatics needed to achieve a meaningful analysis of this unprecedented amount of research data. The Internet is now an essential tool for the molecular biologist, and the World Wide Web is the major access method. Here a lucid explanation is given on how to use it and what biological material and services may be obtained.
Computing resources for the following are clearly explained:
* Internet resources - databases etc.
* Genetic analysis
* Sib-pair studies
* Comparative mapping
* Radiation hybrids
* Sequence ready clone maps
* Human genome sequencing
* ESTs
* Gene prediction
* Gene expression
This timely book represents an invaluable guide to working scientists wishing to make use of the powerful computing tools now available to assist them in the field of human genome analysis. Information on the practicalities of making effective use of computing in the generation, processing, analysis and storage of data, as well as in making the data available to the whole community that now needs to use it, is presented clearly by experts in the field.

About the Author

Martin Bishop works for the British Medicinal Resource Council as Bioinformatics Manager at the U.K. Human Genome Mapping Project Resource Centre.


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Inside This Book (learn more)
First Sentence:
Since the first edition of this book was published, the genome community has seen an explosion in the number and variety of resources available over the Internet. Read the first page
Key Phrases - Statistically Improbable Phrases (SIPs): (learn more)
equal retention model, obligate breaks, obligate breakpoints, minimum breaks analysis, gene identification tools, minimal tiling set, branch point signal, finishing criteria, insert into results, gene structure prediction, gene finders, new contigs, sequence ready contigs, true exons, anatomy database, potential splice sites, framework markers, splice site prediction, transcriptional sites, marker cursor, radiation hybrid map, physical mapping data, tiling path, large text field, retention frequency
Key Phrases - Capitalized Phrases (CAPs): (learn more)
Nucleic Acids Res, Sanger Centre, Human Genome Computing, Whitehead Institute, Nature Genet, Academic Press Limited, Biology Workbench, Genome Res, Mouse Genome Database, Research Genetics, World Wide Web, Menlo Park, Mouse Atlas, Mouse Embryo Anatomy Database, New York, Online Mendelian Inheritance, Methods Enzymol, Virtual Library, Technical Report, Trends Genet, Amino Acid Translation, Human Genome Mapping Project Resource Centre, Position Score Sequence, Saccharomyces Genome Database, Wellcome Trust Genome Campus
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